Package | Description |
---|---|
org.sbml.jsbml |
Pure Java™ implementation of the data structures to represent all SBML
constructs.
|
org.sbml.jsbml.validator |
This package provides methods to validate the content of SBML models, whether
given in a file or as a data structure.
|
org.sbml.jsbml.validator.offline |
Provides classes to validate any kind of object offline.
|
org.sbml.jsbml.validator.offline.constraints |
Any validation constraints related to the multi package.
|
org.sbml.jsbml.validator.offline.factory |
Modifier and Type | Method | Description |
---|---|---|
void |
SBMLDocument.setConsistencyChecks(SBMLValidator.CHECK_CATEGORY category,
boolean apply) |
Controls the consistency checks that are performed when
SBMLDocument.checkConsistency() is called. |
Modifier and Type | Method | Description |
---|---|---|
static SBMLValidator.CHECK_CATEGORY |
SBMLValidator.CHECK_CATEGORY.valueOf(java.lang.String name) |
Returns the enum constant of this type with the specified name.
|
static SBMLValidator.CHECK_CATEGORY[] |
SBMLValidator.CHECK_CATEGORY.values() |
Returns an array containing the constants of this enum type, in
the order they are declared.
|
Modifier and Type | Method | Description |
---|---|---|
SBMLValidator.CHECK_CATEGORY[] |
ValidationContext.getCheckCategories() |
Returns all the enabled check categories.
|
Modifier and Type | Method | Description |
---|---|---|
void |
ValidationContext.enableCheckCategories(SBMLValidator.CHECK_CATEGORY[] categories,
boolean enable) |
Calls
ValidationContext.enableCheckCategory(CHECK_CATEGORY, boolean) for every
SBMLValidator.CHECK_CATEGORY in the array. |
void |
ValidationContext.enableCheckCategory(SBMLValidator.CHECK_CATEGORY category,
boolean enable) |
Enables or disables the selected category.
|
boolean |
ValidationContext.isEnabledCategory(SBMLValidator.CHECK_CATEGORY checkCategory) |
Returns true if the given
SBMLValidator.CHECK_CATEGORY is enabled in this ValidationContext . |
void |
ValidationContext.loadConstraints(java.lang.Class<?> clazz,
int level,
int version,
SBMLValidator.CHECK_CATEGORY[] categories) |
Loads the constraints to validate a Object from the given class.
|
Constructor | Description |
---|---|
LoggingValidationContext(int level,
int version,
AnyConstraint<java.lang.Object> rootConstraint,
java.util.Set<SBMLValidator.CHECK_CATEGORY> categories) |
Creates a new
LoggingValidationContext instance. |
ValidationContext(int level,
int version,
AnyConstraint<java.lang.Object> rootConstraint,
java.util.Set<SBMLValidator.CHECK_CATEGORY> categories) |
Creates a new
ValidationContext for the given SBML level and version. |
Modifier and Type | Method | Description |
---|---|---|
SBMLValidator.CHECK_CATEGORY |
CategoryConstraintGroup.getCategory() |
Returns the
SBMLValidator.CHECK_CATEGORY this ConstraintGroup is linked to. |
Modifier and Type | Method | Description |
---|---|---|
void |
AdjacentDomainsConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
AdvectionCoefficientConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
AlgebraicRuleConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
AnalyticGeometryConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
AnalyticVolumeConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
AndConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ArraysSBasePluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
AssignmentConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
AssignmentRuleConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ASTNodeConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
BindingSiteSpeciesTypeConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
BoundaryConditionConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
BoundaryConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
BoundingBoxConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ColorDefinitionConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CompartmentConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CompartmentGlyphConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CompartmentMappingConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CompartmentReferenceConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CompartmentTypeConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CompModelPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CompSBasePluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CompSBMLDocumentPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ConstraintConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ConstraintDeclaration.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
Adds all error codes which are needed for a check in this category to the
set.
|
void |
CoordinateComponentConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CSGeometryConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CSGHomogeneousTransformationConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CSGObjectConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CSGPrimitiveConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CSGRotationConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CSGScaleConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CSGSetOperatorConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CSGTranslationConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CubicBezierConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
CurveConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
DefaultValuesConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
DelayConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
DeletionConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
DiffusionCoefficientConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
DimensionConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
DimensionsConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
DomainConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
DomainTypeConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
EllipseConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
EventAssignmentConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
EventConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ExplicitRuleConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ExternalModelDefinitionConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
FBCReactionPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
FunctionDefinitionConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
FunctionTermConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
GeneProductConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
GeneralGlyphConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
GeometryConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
GeometryDefinitionConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
GlobalRenderInformationConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
GradientBaseConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
GradientStopConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
GraphicalObjectConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
GraphicalPrimitive1DConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
GraphicalPrimitive2DConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ImageConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
IndexConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
InitialAssignmentConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
InputConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
InSpeciesTypeBondConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
InteriorPointConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
KineticLawConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
LayoutConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
LayoutModelPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
LinearGradientConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
LineEndingConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
LineSegmentConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
LocalParameterConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
LocalRenderInformationConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
LocalStyleConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
MathContainerConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
MixedGeometryConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ModelConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
MultiCompartmentPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
MultiModelPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
MultiSpeciesTypeConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ObjectiveConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
OrConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
OrdinalMappingConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
OutputConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ParameterConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ParametricGeometryConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ParametricObjectConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
PointConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
PolygonConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
PortConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
PossibleSpeciesFeatureValueConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
PriorityConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
QualitativeSpeciesConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
QualModelPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RadialGradientConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RateRuleConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ReactionConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ReactionGlyphConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RectangleConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ReferenceGlyphConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RenderCubicBezierConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RenderCurveConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RenderGraphicalObjectPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RenderGroupConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RenderInformationBaseConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RenderLayoutPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RenderListOfLayoutsPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RenderPointConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ReplacedByConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
ReplacedElementConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
RuleConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SampledFieldConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SampledFieldGeometryConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SampledVolumeConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SBaseConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SBaseRefConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SBaseWithDerivedUnitConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SBaseWithUnitConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SBMLDocumentConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SimpleSpeciesReferenceConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpatialCompartmentPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpatialModelPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpatialParameterPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpatialPointsConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpatialReactionPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpatialSpeciesPluginConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpatialSymbolReferenceConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpeciesConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpeciesFeatureTypeConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpeciesGlyphConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpeciesReferenceConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpeciesReferenceGlyphConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpeciesTypeComponentIndexConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpeciesTypeConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SpeciesTypeInstanceConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
StyleConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
SubmodelConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
TextConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
TextGlyphConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
Transformation2DConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
TransformationComponentConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
TransformationConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
TransitionConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
TreeNodeConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
TriggerConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
UnitConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
void |
UnitDefinitionConstraints.addErrorCodesForCheck(java.util.Set<java.lang.Integer> set,
int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
<T> ConstraintGroup<T> |
AbstractConstraintDeclaration.createConstraints(int[] errorCodes,
ValidationContext context,
SBMLValidator.CHECK_CATEGORY category) |
Creates the constraints with the given error codes and regroup them into a
CategoryConstraintGroup . |
<T> ConstraintGroup<T> |
AbstractConstraintDeclaration.createConstraints(int level,
int version,
SBMLValidator.CHECK_CATEGORY[] categories,
ValidationContext context) |
|
AnyConstraint<?> |
AbstractConstraintDeclaration.createConstraints(int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
|
<T> ConstraintGroup<T> |
ConstraintDeclaration.createConstraints(int level,
int version,
SBMLValidator.CHECK_CATEGORY[] categories,
ValidationContext context) |
Creates all the constraints which are needed to validate the categories
in the given level and version of SBML.
|
AnyConstraint<?> |
ConstraintDeclaration.createConstraints(int level,
int version,
SBMLValidator.CHECK_CATEGORY category,
ValidationContext context) |
Creates all the constraints which are needed to validate this category
in the given level and version of SBML.
|
Constructor | Description |
---|---|
CategoryConstraintGroup(SBMLValidator.CHECK_CATEGORY category) |
Creates a new
CategoryConstraintGroup instance linked to a specific SBMLValidator.CHECK_CATEGORY . |
Modifier and Type | Method | Description |
---|---|---|
<T> ConstraintGroup<T> |
ConstraintFactory.getConstraintsForClass(java.lang.Class<?> clazz,
SBMLValidator.CHECK_CATEGORY[] categories,
int level,
int version,
ValidationContext context) |
Gets all the constraints for one class and some
SBMLValidator.CHECK_CATEGORY s. |