Package | Description |
---|---|
org.sbml.jsbml.ext.fbc |
Provides classes for the
Flux Balance Constraints package (FBC).
|
org.sbml.jsbml.ext.fbc.converters |
Modifier and Type | Method | Description |
---|---|---|
GeneProductAssociation |
GeneProductAssociation.clone() |
|
GeneProductAssociation |
FBCReactionPlugin.createGeneProductAssociation() |
|
GeneProductAssociation |
FBCReactionPlugin.createGeneProductAssociation(java.lang.String id) |
|
GeneProductAssociation |
FBCReactionPlugin.getGeneProductAssociation() |
Returns the value of
FBCReactionPlugin.geneProductAssociation . |
Modifier and Type | Method | Description |
---|---|---|
void |
FBCReactionPlugin.setGeneProductAssociation(GeneProductAssociation geneProductAssociation) |
Sets the value of
FBCReactionPlugin.geneProductAssociation |
Constructor | Description |
---|---|
GeneProductAssociation(GeneProductAssociation gpa) |
Creates a new
GeneProductAssociation instance. |
Modifier and Type | Method | Description |
---|---|---|
static GeneProductAssociation |
GPRParser.parseGPR(Reaction r,
java.lang.String geneReactionRule,
boolean omitGenericTerms) |
Parses a gene association string as used in COBRA in SBML level 2 into a
GeneProductAssociation
used in SBML level 3. |
static GeneProductAssociation |
GPRParser.parseGPR(Reaction r,
java.lang.String geneReactionRule,
boolean omitGenericTerms,
boolean displayWarning) |
Parses a gene association string as used in COBRA in SBML level 2 into a
GeneProductAssociation
used in SBML level 3. |