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| CaOmexManifest () |
| Creates a new CaOmexManifest instance. More...
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| CaOmexManifest (CaNamespaces *omexns) |
| Creates a new CaOmexManifest using the given CaNamespaces object omexns . More...
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| CaOmexManifest (const CaOmexManifest &orig) |
| Copy constructor for CaOmexManifest. More...
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CaOmexManifest & | operator= (const CaOmexManifest &rhs) |
| Assignment operator for CaOmexManifest. More...
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virtual CaOmexManifest * | clone () const |
| Creates and returns a deep copy of this CaOmexManifest object. More...
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virtual | ~CaOmexManifest () |
| Destructor for CaOmexManifest. More...
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const CaListOfContents * | getListOfContents () const |
| Returns the CaListOfContents from this CaOmexManifest. More...
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CaListOfContents * | getListOfContents () |
| Returns the CaListOfContents from this CaOmexManifest. More...
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CaContent * | getContent (unsigned int n) |
| Get a CaContent from the CaOmexManifest. More...
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const CaContent * | getContent (unsigned int n) const |
| Get a CaContent from the CaOmexManifest. More...
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int | addContent (const CaContent *cc) |
| Adds a copy of the given CaContent to this CaOmexManifest. More...
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unsigned int | getNumContents () const |
| Get the number of CaContent objects in this CaOmexManifest. More...
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CaContent * | createContent () |
| Creates a new CaContent object, adds it to this CaOmexManifest object and returns the CaContent object created. More...
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CaContent * | removeContent (unsigned int n) |
| Removes the nth CaContent from this CaOmexManifest and returns a pointer to it. More...
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virtual const std::string & | getElementName () const |
| Returns the XML element name of this CaOmexManifest object. More...
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virtual int | getTypeCode () const |
| Returns the libCombine type code for this CaOmexManifest object. More...
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virtual bool | hasRequiredElements () const |
| Predicate returning true if all the required elements for this CaOmexManifest object have been set. More...
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virtual CaBase * | getElementBySId (const std::string &id) |
| Returns the first child element that has the given id in the model-wide SId namespace, or NULL if no such object is found. More...
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virtual const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces * | getNamespaces () const |
| Returns the value of the "Namespaces" element of this CaOmexManifest. More...
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virtual LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces * | getNamespaces () |
| Returns the value of the "Namespaces" element of this CaOmexManifest. More...
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const CaErrorLog * | getErrorLog () const |
| Returns the value of the "CaErrorLog" element of this CaOmexManifest. More...
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CaErrorLog * | getErrorLog () |
| Returns the value of the "CaErrorLog" element of this CaOmexManifest. More...
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CaError * | getError (unsigned int n) |
| Get a CaError from the CaDocument. More...
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const CaError * | getError (unsigned int n) const |
| Get a CaError from the CaDocument. More...
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unsigned int | getNumErrors () const |
| Get the number of CaError objects in this CaDocument. More...
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unsigned int | getNumErrors (unsigned int severity) const |
| Get the number of CaError objects in this CaDocument with the given severity. More...
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virtual unsigned int | getLevel () const |
| return the level of this document
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virtual unsigned int | getVersion () const |
| return the version of this document
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virtual | ~CaBase () |
| Destroys this object. More...
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CaBase & | operator= (const CaBase &rhs) |
| Assignment operator for CaBase. More...
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virtual CaBase * | clone () const =0 |
| Creates and returns a deep copy of this CaBase object. More...
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virtual CaBase * | getElementBySId (const std::string &id) |
| Returns the first child element it can find with a specific "id" attribute value, or NULL if no such object is found. More...
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virtual const CaBase * | getElementBySId (const std::string &metaid) const |
| Returns the first child element it can find with a specific "id" attribute value, or NULL if no such object is found. More...
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virtual CaBase * | getElementByMetaId (const std::string &metaid) |
| Returns the first child element it can find with a specific "metaid" attribute value, or NULL if no such object is found. More...
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virtual const CaBase * | getElementByMetaId (const std::string &metaid) const |
| Returns the first child element it can find with a specific "metaid" attribute value, or NULL if no such object is found. More...
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virtual List * | getAllElements () |
| Returns a List of all child CaBase objects, including those nested to an arbitrary depth. More...
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const std::string & | getMetaId () const |
| Returns the value of the "metaid" attribute of this object. More...
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std::string & | getMetaId () |
| Returns the value of the "metaid" attribute of this object. More...
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virtual const std::string & | getId () const |
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LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode * | getNotes () |
| Returns the content of the "notes" subelement of this object as a tree of XMLNode objects. More...
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const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode * | getNotes () const |
| Returns the content of the "notes" subelement of this object as a tree of XMLNode objects. More...
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std::string | getNotesString () |
| Returns the content of the "notes" subelement of this object as a string. More...
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std::string | getNotesString () const |
| Returns the content of the "notes" subelement of this object as a string. More...
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LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode * | getAnnotation () |
| Returns the content of the "annotation" subelement of this object as a tree of XMLNode objects. More...
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const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode * | getAnnotation () const |
| Returns the content of the "annotation" subelement of this object as a tree of XMLNode objects. More...
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std::string | getAnnotationString () |
| Returns the content of the "annotation" subelement of this object as a character string. More...
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std::string | getAnnotationString () const |
| Returns the content of the "annotation" subelement of this object as a character string. More...
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virtual const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces * | getNamespaces () const |
| Returns a list of the XML Namespaces declared on the OMEX document owning this object. More...
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virtual LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces * | getNamespaces () |
| Returns a list of the XML Namespaces declared on the OMEX document owning this object. More...
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const CaOmexManifest * | getCaOmexManifest () const |
| Returns the CaOmexManifest object containing this object instance. More...
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CaOmexManifest * | getCaOmexManifest () |
| Returns the CaOmexManifest object containing this object instance. More...
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CaBase * | getParentCaObject () |
| Returns the parent OMEX object containing this object. More...
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const CaBase * | getParentCaObject () const |
| Returns the parent OMEX object containing this object. More...
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CaBase * | getAncestorOfType (int type) |
| Returns the first ancestor object that has the given OMEX type code. More...
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const CaBase * | getAncestorOfType (int type) const |
| Returns the first ancestor object that has the given OMEX type code. More...
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unsigned int | getLine () const |
| Returns the line number on which this object first appears in the XML representation of the OMEX document, or '0' if the object was created, not read from a file. More...
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unsigned int | getColumn () const |
| Returns the column number on which this object first appears in the XML representation of the OMEX document, or '0' if the object was created, not read from a file. More...
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bool | isSetMetaId () const |
| Predicate returning true if this object's "metaid" attribute is set. More...
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virtual bool | isSetId () const |
| Predicate returning true if this object's "id" attribute is set. More...
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bool | isSetNotes () const |
| Predicate returning true if this object's "notes" subelement exists and has content. More...
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bool | isSetAnnotation () const |
| Predicate returning true if this object's "annotation" subelement exists and has content. More...
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int | setMetaId (const std::string &metaid) |
| Sets the value of the meta-identifier attribute of this object. More...
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virtual int | setId (const std::string &sid) |
| Sets the value of the "id" attribute of this OMEX object. More...
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virtual int | setAnnotation (LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation) |
| Sets the value of the "annotation" subelement of this OMEX object. More...
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virtual int | setAnnotation (const std::string &annotation) |
| Sets the value of the "annotation" subelement of this OMEX object. More...
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virtual int | appendAnnotation (const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation) |
| Appends the given annotation to the "annotation" subelement of this object. More...
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virtual int | appendAnnotation (const std::string &annotation) |
| Appends the given annotation to the "annotation" subelement of this object. More...
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int | removeTopLevelAnnotationElement (const std::string elementName, const std::string elementURI="") |
| Removes the top-level element within the "annotation" subelement of this OMEX object with the given name and optional URI. More...
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int | replaceTopLevelAnnotationElement (const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *annotation) |
| Replaces the given top-level element within the "annotation" subelement of this OMEX object and with the annotation element supplied. More...
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int | replaceTopLevelAnnotationElement (const std::string &annotation) |
| Replaces the given top-level element within the "annotation" subelement of this OMEX object and with the annotation element supplied. More...
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int | setNotes (const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *notes) |
| Sets the value of the "notes" subelement of this OMEX object. More...
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int | setNotes (const std::string ¬es, bool addXHTMLMarkup=false) |
| Sets the value of the "notes" subelement of this OMEX object to a copy of the string notes . More...
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int | appendNotes (const LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNode *notes) |
| Appends the given notes to the "notes" subelement of this object. More...
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int | appendNotes (const std::string ¬es) |
| Appends the given notes to the "notes" subelement of this object. More...
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int | setNamespaces (LIBSBML_CPP_NAMESPACE_QUALIFIER XMLNamespaces *xmlns) |
| Sets the namespaces relevant of this OMEX object. More...
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int | unsetMetaId () |
| Unsets the value of the "metaid" attribute of this OMEX object. More...
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virtual int | unsetId () |
| Unsets the value of the "id" attribute of this OMEX object. More...
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int | unsetNotes () |
| Unsets the value of the "notes" subelement of this OMEX object. More...
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int | unsetAnnotation () |
| Unsets the value of the "annotation" subelement of this OMEX object. More...
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unsigned int | getLevel () const |
| Returns the OMEX Level of the CaOmexManifest object containing this object. More...
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unsigned int | getVersion () const |
| Returns the Version within the OMEX Level of the CaOmexManifest object containing this object. More...
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virtual int | getTypeCode () const |
| Returns the libCombine type code for this object. More...
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bool | hasValidLevelVersionNamespaceCombination () |
| Predicate returning true if this object's level/version and namespace values correspond to a valid OMEX specification. More...
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virtual const std::string & | getElementName () const =0 |
| Returns the XML element name of this object. More...
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char * | toCa () |
| Returns a string consisting of a partial OMEX corresponding to just this object. More...
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virtual bool | isSetAttribute (const std::string &attributeName) const |
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virtual int | removeFromParentAndDelete () |
| Removes this object from its parent. More...
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bool | matchesCaNamespaces (const CaBase *sb) |
| Returns true if this object's set of XML namespaces are the same as the given object's XML namespaces. More...
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bool | matchesCaNamespaces (const CaBase *sb) const |
| Returns true if this object's set of XML namespaces are the same as the given object's XML namespaces. More...
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bool | matchesRequiredCaNamespacesForAddition (const CaBase *sb) |
| Returns true if this object's set of XML namespaces are a subset of the given object's XML namespaces. More...
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bool | matchesRequiredCaNamespacesForAddition (const CaBase *sb) const |
| Returns true if this object's set of XML namespaces are a subset of the given object's XML namespaces. More...
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int | setUserData (void *userData) |
| Sets the user data of this element. More...
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void * | getUserData () const |
| Returns the user data that has been previously set via setUserData(). More...
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bool | isSetUserData () const |
| Predicate returning true or false depending on whether the user data of this element has been set. More...
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int | unsetUserData () |
| Unsets the user data of this element. More...
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CaErrorLog * | getErrorLog () |
| Returns the CaErrorLog used to log errors while reading and validating OMEX. More...
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