Package | Description |
---|---|
org.sbml.jsbml |
Pure Java™ implementation of the data structures to represent all SBML
constructs.
|
org.sbml.jsbml.math | |
org.sbml.jsbml.util |
A collection of handy utilities when working with JSBML classes,
such as classes for String manipulation or mathematical operations.
|
org.sbml.jsbml.xml.stax |
Contains classes that use the Streaming API for XML (StAX)
to read or write an SBML file.
|
Modifier and Type | Method | Description |
---|---|---|
java.util.List<TreeNodeChangeListener> |
AbstractTreeNode.getListOfTreeNodeChangeListeners() |
Modifier and Type | Method | Description |
---|---|---|
void |
AbstractTreeNode.addTreeNodeChangeListener(TreeNodeChangeListener listener) |
|
void |
AbstractTreeNode.addTreeNodeChangeListener(TreeNodeChangeListener listener,
boolean recursive) |
|
static SBMLDocument |
SBMLReader.read(java.io.File file,
TreeNodeChangeListener listener) |
Factory method for reading SBML from a given
File . |
SBMLDocument |
SBMLReader.readSBML(java.io.File file,
TreeNodeChangeListener listener) |
|
void |
AbstractTreeNode.removeTreeNodeChangeListener(TreeNodeChangeListener listener) |
|
void |
AbstractTreeNode.removeTreeNodeChangeListener(TreeNodeChangeListener listener,
boolean recursive) |
|
void |
SBase.removeTreeNodeChangeListener(TreeNodeChangeListener listener) |
Removes the given
TreeNodeChangeListener from this element. |
Modifier and Type | Method | Description |
---|---|---|
boolean |
AbstractTreeNode.addAllChangeListeners(java.util.Collection<TreeNodeChangeListener> listeners) |
|
boolean |
AbstractTreeNode.addAllChangeListeners(java.util.Collection<TreeNodeChangeListener> listeners,
boolean recursive) |
Modifier and Type | Method | Description |
---|---|---|
java.util.List<TreeNodeChangeListener> |
ASTUnknown.getListOfTreeNodeChangeListeners() |
Modifier and Type | Method | Description |
---|---|---|
void |
ASTUnknown.addTreeNodeChangeListener(TreeNodeChangeListener listener) |
|
void |
ASTUnknown.addTreeNodeChangeListener(TreeNodeChangeListener listener,
boolean recursive) |
|
void |
ASTUnknown.removeTreeNodeChangeListener(TreeNodeChangeListener listener) |
|
void |
ASTUnknown.removeTreeNodeChangeListener(TreeNodeChangeListener listener,
boolean recursive) |
Modifier and Type | Method | Description |
---|---|---|
boolean |
ASTUnknown.addAllChangeListeners(java.util.Collection<TreeNodeChangeListener> listeners) |
|
boolean |
ASTUnknown.addAllChangeListeners(java.util.Collection<TreeNodeChangeListener> listeners,
boolean recursive) |
Modifier and Type | Class | Description |
---|---|---|
class |
SimpleTreeNodeChangeListener |
This very simple implementation of an
TreeNodeChangeListener writes
all the events to the standard out stream. |
Modifier and Type | Method | Description |
---|---|---|
java.util.List<TreeNodeChangeListener> |
TreeNodeWithChangeSupport.getListOfTreeNodeChangeListeners() |
Returns all
TreeNodeChangeListener s that are assigned to this
element. |
Modifier and Type | Method | Description |
---|---|---|
void |
TreeNodeWithChangeSupport.addTreeNodeChangeListener(TreeNodeChangeListener listener) |
Adds recursively a listener to the
TreeNodeWithChangeSupport
object and all of its sub-elements. |
void |
TreeNodeWithChangeSupport.addTreeNodeChangeListener(TreeNodeChangeListener listener,
boolean recursive) |
Adds a listener to this
TreeNodeWithChangeSupport object and
optionally also to all of its child nodes. |
void |
TreeNodeWithChangeSupport.removeTreeNodeChangeListener(TreeNodeChangeListener listener) |
Removes recursively the given change listener from this element.
|
void |
TreeNodeWithChangeSupport.removeTreeNodeChangeListener(TreeNodeChangeListener listener,
boolean recursive) |
Removes the given change listener from this element.
|
Modifier and Type | Method | Description |
---|---|---|
boolean |
TreeNodeWithChangeSupport.addAllChangeListeners(java.util.Collection<TreeNodeChangeListener> listeners) |
Adds recursively all given
TreeNodeChangeListener instances to
this element. |
boolean |
TreeNodeWithChangeSupport.addAllChangeListeners(java.util.Collection<TreeNodeChangeListener> listeners,
boolean recursive) |
Modifier and Type | Method | Description |
---|---|---|
ASTNode |
SBMLReader.readMathML(java.lang.String mathML,
TreeNodeChangeListener listener) |
Reads a mathML String into an
ASTNode . |
ASTNode |
SBMLReader.readMathML(java.lang.String mathML,
TreeNodeChangeListener listener,
MathContainer parent) |
Reads a mathML
String into an ASTNode . |
XMLNode |
SBMLReader.readNotes(java.lang.String notesXHTML,
TreeNodeChangeListener listener) |
Reads a notes XML
String into an XMLNode . |
SBMLDocument |
SBMLReader.readSBML(java.io.File file,
TreeNodeChangeListener listener) |
Reads a SBML String from the given file.
|
SBMLDocument |
SBMLReader.readSBML(javax.xml.stream.XMLEventReader xmlEventReader,
TreeNodeChangeListener listener) |
Reads an
SBMLDocument from the given XMLEventReader |
SBMLDocument |
SBMLReader.readSBMLFromStream(java.io.InputStream stream,
TreeNodeChangeListener listener) |
Reads a SBML document from the given
stream . |
SBMLDocument |
SBMLReader.readSBMLFromString(java.lang.String xml,
TreeNodeChangeListener listener) |
Reads a SBML model from the given XML String.
|