Package | Description |
---|---|
org.sbml.jsbml.ext.render.director |
This package contains interfaces and classes to create an implementation
to create a graphical representation of the
Layout
of a SBML document. |
Modifier and Type | Interface | Description |
---|---|---|
interface |
AssociationNode<T> |
|
interface |
DissociationNode<T> |
|
interface |
OmittedProcessNode<T> |
|
interface |
ProcessNode<T> |
|
interface |
SBGNNodeWithCloneMarker<T> |
|
interface |
SBGNProcessNode<T> |
Interface for all SBGN specified process nodes.
|
interface |
UncertainProcessNode<T> |
Modifier and Type | Class | Description |
---|---|---|
class |
AbstractSBGNnode<T> |
|
class |
AbstractSBGNNodeWithCloneMarker<T> |
|
class |
AbstractSBGNProcessNode<T> |
|
class |
Compartment<T> |
|
class |
Macromolecule<T> |
interface all the different graphical representations for macromolecule nodes
have to implement
|
class |
NucleicAcidFeature<T> |
|
class |
PerturbingAgent<T> |
|
class |
SimpleChemical<T> |
Abstract class that all the different graphical representations for simple
chemical nodes have to extend.
|
class |
SourceSink<T> |
Abstract class that all the different graphical representations for the empty
set sign have to implement
|
class |
UnspecifiedNode<T> |
Abstract class that all the different graphical representations for
unspecified entity pool nodes have to implement
|
Modifier and Type | Method | Description |
---|---|---|
SBGNNode<NodeT> |
AbstractLayoutBuilder.getSBGNNode(int sboTerm) |
Create the correct
SBGNNode according to the given SBO term. |