java.io.Serializable
, java.lang.Cloneable
, javax.swing.tree.TreeNode
, ListOfSpeciesFeatureContent
, NamedSBase
, SBase
, UniqueNamedSBase
, UniqueSId
, TreeNodeWithChangeSupport
public class SubListOfSpeciesFeature extends ListOf<SpeciesFeature> implements UniqueNamedSBase, ListOfSpeciesFeatureContent
SpeciesFeature
that have a specific Relation
between them.
This class derives from ListOf
ListOf.Type
JSBML_WRONG_SBO_TERM
Constructor | Description |
---|---|
SubListOfSpeciesFeature() |
Creates an SubListOfSpeciesFeature instance
|
SubListOfSpeciesFeature(int level,
int version) |
Creates a SubListOfSpeciesFeature instance with a level and version.
|
SubListOfSpeciesFeature(java.lang.String id) |
Creates a SubListOfSpeciesFeature instance with an id.
|
SubListOfSpeciesFeature(java.lang.String id,
int level,
int version) |
Creates a SubListOfSpeciesFeature instance with an id, level, and version.
|
SubListOfSpeciesFeature(SubListOfSpeciesFeature obj) |
Clone constructor
|
Modifier and Type | Method | Description |
---|---|---|
SubListOfSpeciesFeature |
clone() |
clones this class
|
boolean |
equals(java.lang.Object obj) |
|
java.lang.String |
getComponent() |
Returns the value of
component . |
Relation |
getRelation() |
Returns the value of
relation . |
int |
hashCode() |
Returns a hash code value for this
SBase instance. |
void |
initDefaults() |
Initializes the default values using the namespace.
|
boolean |
isSetComponent() |
Returns whether
component is set. |
boolean |
isSetRelation() |
Returns whether
relation is set. |
boolean |
readAttribute(java.lang.String attributeName,
java.lang.String prefix,
java.lang.String value) |
Sets the given attribute in this
SBase . |
void |
setComponent(java.lang.String component) |
Sets the value of component
|
void |
setRelation(Relation relation) |
Sets the value of relation
|
boolean |
unsetComponent() |
Unsets the variable component.
|
boolean |
unsetRelation() |
Unsets the variable relation.
|
java.util.Map<java.lang.String,java.lang.String> |
writeXMLAttributes() |
Returns a map with all the attributes of this
SBase that
need to be written out in XML. |
addCVTerm, addDeclaredNamespace, addExtension, addPlugin, addResources, appendAnnotation, appendAnnotation, appendNotes, appendNotes, createHistory, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, filterCVTerms, fireNodeRemovedEvent, firePropertyChange, getAllDeclaredNamespaces, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementByMetaId, getElementBySId, getExtension, getExtensionCount, getExtensionPackages, getFirstElementIndex, getHistory, getId, getLevel, getLevelAndVersion, getMetaId, getModel, getName, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getPackageName, getPackageVersion, getParent, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getURI, getVersion, hasExtension, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isIdMandatory, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetId, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetName, isSetNotes, isSetPackageVErsion, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, isValidLevelAndVersionCombination, isValidMetaId, registerChild, removeCVTerm, removeCVTerm, removeDeclaredNamespaceByNamespace, removeDeclaredNamespaceByPrefix, removeTopLevelAnnotationElement, removeTopLevelAnnotationElement, removeTopLevelAnnotationElement, replaceTopLevelAnnotationElement, replaceTopLevelAnnotationElement, setAnnotation, setAnnotation, setAnnotation, setHistory, setId, setLevel, setMetaId, setName, setNamespace, setNotes, setNotes, setPackageVersion, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, toString, unregisterChild, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetId, unsetMetaId, unsetName, unsetNamespace, unsetNotes, unsetPlugin, unsetSBOTerm
addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, children, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, getIndex, getListOfTreeNodeChangeListeners, getNumChildren, getRoot, getTreeNodeChangeListenerCount, getUserObject, indexOf, isLeaf, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeTreeNodeChangeListener, removeUserObject, setParent, userObjectKeySet
of, of, of, of, of, of, of, of, of, of, of, of, replaceAll, sort, spliterator
add, add, addAll, addAll, append, clear, contains, containsAll, filterList, firstHit, get, get, getAllowsChildren, getChildAt, getChildCount, getElementName, getFirst, getLast, getOtherListName, getSBaseListType, indexOf, initListOf, isDebugMode, isEmpty, iterator, lastIndexOf, listIterator, listIterator, newInstance, remove, remove, remove, remove, removeAll, removeAll, removeFirst, retainAll, set, setDebugMode, setListOf, setOtherListName, setPackageName, setSBaseListType, setSBaseListType, size, subList, toArray, toArray, unsetSBaseListType
getId, getName, isIdMandatory, isSetId, isSetName, setId, setName, unsetId, unsetName
addCVTerm, addDeclaredNamespace, addExtension, addPlugin, appendAnnotation, appendAnnotation, appendNotes, appendNotes, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, filterCVTerms, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementByMetaId, getElementBySId, getElementName, getExtension, getExtensionCount, getExtensionPackages, getHistory, getLevel, getLevelAndVersion, getMetaId, getModel, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getPackageName, getPackageVersion, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getURI, getVersion, hasExtension, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetNotes, isSetPackageVErsion, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, registerChild, removeCVTerm, removeCVTerm, removeDeclaredNamespaceByNamespace, removeDeclaredNamespaceByPrefix, removeTopLevelAnnotationElement, removeTopLevelAnnotationElement, removeTopLevelAnnotationElement, removeTreeNodeChangeListener, replaceTopLevelAnnotationElement, replaceTopLevelAnnotationElement, setAnnotation, setAnnotation, setAnnotation, setHistory, setLevel, setMetaId, setNotes, setNotes, setPackageVersion, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, unregisterChild, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetMetaId, unsetNotes, unsetPlugin, unsetSBOTerm
children, getAllowsChildren, getChildAt, getChildCount, getIndex, getParent, isLeaf
addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, fireNodeRemovedEvent, firePropertyChange, getListOfTreeNodeChangeListeners, getRoot, getTreeNodeChangeListenerCount, getUserObject, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeUserObject, userObjectKeySet
public SubListOfSpeciesFeature()
public SubListOfSpeciesFeature(java.lang.String id)
id
- the identifier for the new element.public SubListOfSpeciesFeature(int level, int version)
level
- SBML Levelversion
- SBML Versionpublic SubListOfSpeciesFeature(java.lang.String id, int level, int version)
id
- the identifier for this element.level
- the SBML Levelversion
- the SBML Versionpublic SubListOfSpeciesFeature(SubListOfSpeciesFeature obj)
public SubListOfSpeciesFeature clone()
clone
in interface SBase
clone
in class ListOf<SpeciesFeature>
public void initDefaults()
public Relation getRelation()
relation
.relation
.public boolean isSetRelation()
relation
is set.relation
is set.public void setRelation(Relation relation)
relation
- the value of relation to be set.public boolean unsetRelation()
true
if relation was set before, otherwise false
.public java.lang.String getComponent()
component
.component
.public boolean isSetComponent()
component
is set.component
is set.public void setComponent(java.lang.String component)
component
- the value of component to be set.public boolean unsetComponent()
true
if component was set before, otherwise false
.public int hashCode()
SBase
SBase
instance.hashCode
in interface SBase
hashCode
in class AbstractSBase
SBase
instance.Object.hashCode()
public boolean equals(java.lang.Object obj)
SBase
public java.util.Map<java.lang.String,java.lang.String> writeXMLAttributes()
SBase
SBase
that
need to be written out in XML.
The attribute name is used as a key and the attribute value as value. If a prefix is needed for the attribute name, it need to be set directly in this map.
writeXMLAttributes
in interface SBase
writeXMLAttributes
in class AbstractSBase
Map
containing the XML attributes of this object.public boolean readAttribute(java.lang.String attributeName, java.lang.String prefix, java.lang.String value)
SBase
SBase
.
If the given attribute name is not recognized, nothing is done and
false
is returned.
readAttribute
in interface SBase
readAttribute
in class AbstractSBase
attributeName
- localName of the XML attributeprefix
- prefix of the XML attributevalue
- value of the XML attributetrue
if the attribute has been successfully read.