Package | Description |
---|---|
org.sbml.jsbml.ext.layout |
Provides classes for the Layout
package.
|
org.sbml.jsbml.ext.render |
Provides classes for the render package, see the specification at sbml.org.
|
Modifier and Type | Class | Description |
---|---|---|
class |
AbstractReferenceGlyph |
Abstract super class for all kinds of glyphs that graphically represent an
instance of
NamedSBase . |
class |
CompartmentGlyph |
The
CompartmentGlyph class is derived from GraphicalObject
and inherits its attributes. |
class |
GeneralGlyph |
The
GeneralGlyph is used to facilitate the representation of elements
other than Compartment , Species
and Reaction and thus
can be used for the display of relationships of Rule
or
elements defined by other SBML packages. |
class |
GraphicalObject |
All the more specific layout elements (
CompartmentGlyph , GeneralGlyph ,
SpeciesGlyph , ReactionGlyph , ReferenceGlyph , TextGlyph ,
and SpeciesReferenceGlyph ) are derived from the class GraphicalObject . |
class |
ReactionGlyph |
Analogous to how a
Reaction object has to at least have one reactant
or product, the ReactionGlyph has to at least have one
SpeciesReferenceGlyph stored in the
ReactionGlyph.listOfSpeciesReferenceGlyphs . |
class |
ReferenceGlyph |
The
ReferenceGlyph element describes the graphical connection between
an arbitrary GraphicalObject (or derived element) and a
GeneralGlyph (which would be an arrow or some curve in most cases). |
class |
SpeciesGlyph |
The
SpeciesGlyph class has an optional species attribute, in
addition to to the attributes from GraphicalObject . |
class |
SpeciesReferenceGlyph |
The
SpeciesReferenceGlyph class describes the graphical connection
between a SpeciesGlyph and a ReactionGlyph (which would be
an arrow or some curve in most cases). |
class |
TextGlyph |
The
TextGlyph class describes the position and dimension of text labels. |
Modifier and Type | Class | Description |
---|---|---|
class |
LineEnding |