public static enum SBMLException.Code extends java.lang.Enum<SBMLException.Code>
Enum Constant | Description |
---|---|
AnnotationNotesNotAllowedLevel1 |
Annotation on <sbml> not permitted in SBML Level 1
|
ApplyCiMustBeModelComponent |
<ci>'s value is not a component in this model
|
ApplyCiMustBeUserFunction |
<ci> does not refer to a function definition
|
ArgsToEqNeedSameType |
Arguments to <eq> or <neq> have inconsistent data types
|
AssignmentToConstantEntity |
Cannot reassign a constant in an assignment rule
|
AssignRuleCompartmentMismatch |
Mismatched units in assignment rule for compartment
|
AssignRuleParameterMismatch |
Mismatched units in assignment rule for parameter
|
AssignRuleSpeciesMismatch |
Mismatched units in assignment rule for species
|
BadCsymbolDefinitionURLValue |
Invalid <csymbol> definitionURL attribute value
|
BadMathML |
Invalid MathML expression
|
BadMathMLNodeType |
Invalid MathML element
|
BooleanOpsNeedBooleanArgs |
Non-boolean argument given to boolean operator
|
BothAmountAndConcentrationSet |
Cannot set both initialConcentration and initialAmount
|
BothStoichiometryAndMath |
Cannot use both stoichiometry and <stoichiometryMath> simultaneously
|
CannotConvertToL1V1 |
Cannot convert to SBML Level 1 Version 1
|
CelsiusNoLongerValid |
Celsius not defined in this Level+Version of SBML
|
CircularRuleDependency |
Circular dependency involving rules and reactions
|
CompartmentShouldHaveSize |
It's best to define a size for every compartment in a model
|
CompartmentTypeNotValidAttribute |
Compartment types not supported in this Level+Version of SBML
|
CompartmentTypeNotValidComponent |
Compartment types not supported in this Level+Version of SBML
|
ConstantNotValidAttribute |
Attribute constant not supported on this component in SBML Level 1
|
ConstantSpeciesNotValidAttribute |
Attribute constant on species not supported in SBML Level 1
|
ConstraintContainsDOCTYPE |
XML DOCTYPE not permitted in constraint messages
|
ConstraintContainsXMLDecl |
XML declarations not permitted in constraint messages
|
ConstraintMathNotBoolean |
Non-boolean math expression in constraint definition
|
ConstraintNotInXHTMLNamespace |
Constraint message is not in XHTML XML namespace
|
ConstraintNotValidComponent |
Constraints not supported in this Level+Version of SBML
|
DelayUnitsNotTime |
Units of delay are not units of time
|
DisallowedDefinitionURLUse |
Disallowed use of MathML definitionURL attribute
|
DisallowedMathMLEncodingUse |
Disallowed use of MathML encoding attribute
|
DisallowedMathMLSymbol |
Disallowed MathML symbol
|
DisallowedMathTypeAttributeUse |
Disallowed use of MathML type attribute
|
DisallowedMathTypeAttributeValue |
Disallowed MathML type attribute value
|
DuplicateAnnotationInvalidInL2v2 |
Duplicate top level annotations invalid for this SBML Level+Version
|
DuplicateAnnotationInvalidInL2v3 |
Duplicate top level annotations invalid for this SBML Level+Version
|
DuplicateAnnotationInvalidInL2v4 |
Duplicate top level annotations invalid for this SBML Level+Version
|
DuplicateAnnotationNamespaces |
Multiple annotations using same XML namespace
|
DuplicateComponentId |
Duplicate component identifier
|
DuplicateLocalParameterId |
Duplicate local parameter identifier
|
DuplicateMetaId |
Duplicate metaid identifier
|
DuplicateUnitDefinitionId |
Duplicate unit definition identifier
|
EmptyListElement |
A given listOf___, if present, cannot be empty
|
EmptyListInKineticLaw |
The list of parameters component, if present, cannot be empty
|
EmptyListInReaction |
Reaction components, if present, cannot be empty
|
EmptyListOfUnits |
Empty list of units not permitted
|
EventAndAssignmentRuleForId |
variable value used in both event assignments and assignment rules
|
EventAssignCompartmentMismatch |
Mismatched units in event assignment for compartment
|
EventAssignmentForConstantEntity |
Cannot assign to a constant component in an event assignment
|
EventAssignParameterMismatch |
Mismatched units in event assignment for parameter
|
EventAssignSpeciesMismatch |
Mismatched units in event assignment for species
|
EventNotValidComponent |
Events not supported in this Level+Version of SBML
|
FailedMathMLReadOfDouble |
Failed to read floating-point number
|
FailedMathMLReadOfExponential |
Failed to read an exponential expression
|
FailedMathMLReadOfInteger |
Failed to read an integer
|
FailedMathMLReadOfRational |
Failed to read a rational expression
|
FormulaInLevel1KL |
Only predefined functions are permitted in SBML Level 1 formulas
|
FuncDefNotValidComponent |
Function definitions are not supported in this Level+Version of SBML
|
FunctionDefMathNotLambda |
Invalid expression in function definition
|
HasOnlySubsNoSpatialUnits |
No spatialSizeUnits permitted if hasOnlySubstanceUnits=true
|
HasOnlySubsUnitsNotValidAttribute |
Attribute hasOnlySubstanceUnits on species not supported in SBML
Level 1
|
IdNotValidAttribute |
Attribute id on species references not supported in SBML Level 1
|
InconsistentArgUnits |
Units of arguments to function call do not match function's
definition
|
IncorrectCompartmentSpatialDimensions |
in SBML Level 1, only three-dimensional compartments are permitted
|
IncorrectOrderInConstraint |
Incorrect order of elements in constraint definition
|
IncorrectOrderInEvent |
Incorrect ordering of components in event definition
|
IncorrectOrderInKineticLaw |
Incorrect ordering of components in kinetic law definition
|
IncorrectOrderInModel |
Incorrect ordering of components in model definition
|
IncorrectOrderInReaction |
Incorrect ordering of components in reaction definition
|
InitAssignCompartmenMismatch |
Mismatched units in initial assignment to compartment
|
InitAssignmentAndRuleForSameId |
Cannot set a value with both initial assignments and assignment rules
simultaneously
|
InitAssignParameterMismatch |
Mismatched units in initial assignment to parameter
|
InitAssignSpeciesMismatch |
Mismatched units in initial assignment to species
|
InitialAssignNotValidComponent |
Initial assignments are not supported in this Level+Version of SBML
|
Invalid1DCompartmentUnits |
Invalid value of units for a one-dimensional compartment
|
Invalid2DCompartmentUnits |
Invalid value of units for a two-dimensional compartment
|
Invalid3DCompartmentUnits |
Invalid value of units for a three-dimensional compartment
|
InvalidApplyCiInLambda |
Invalid forward reference in <apply><ci>...</ci></apply> value
|
InvalidAreaRedefinition |
Invalid redefinition of area
|
InvalidAssignRuleVariable |
Invalid variable reference in assignment rule
|
InvalidCiInLambda |
Unknown <ci> reference in <lambda>
|
InvalidCompartmentSBOTerm |
Invalid sboTerm value for compartment
|
InvalidCompartmentTypeRef |
Invalid compartmentType reference
|
InvalidCompartmentTypeSBOTerm |
Invalid sboTerm value for compartment type
|
InvalidConstraintContent |
Invalid content for constraint message
|
InvalidConstraintSBOTerm |
Invalid sboTerm value for constraint
|
InvalidDelaySBOTerm |
Invalid sboTerm value for event delay
|
InvalidEventAssignmentSBOTerm |
Invalid sboTerm value for event assignment
|
InvalidEventAssignmentVariable |
Invalid value for variable in event assignment
|
InvalidEventSBOTerm |
Invalid sboTerm value for event
|
InvalidFunctionDefReturnType |
Function return type must be either numerical or boolean
|
InvalidFunctionDefSBOTerm |
Invalid sboTerm value for function definition
|
InvalidIdSyntax |
Invalid identifier syntax
|
InvalidInitAssignSBOTerm |
Invalid sboTerm value for initial assignment
|
InvalidInitAssignSymbol |
Invalid symbol reference in initial assignment
|
InvalidKineticLawSBOTerm |
Invalid sboTerm value for kinetic law
|
InvalidL1CompartmentUnits |
Invalid units for a compartment in SBML Level 1
|
InvalidLengthRedefinition |
Invalid redefinition of length
|
InvalidMathElement |
Invalid MathML
|
InvalidMetaidSyntax |
Invalid metaid value syntax
|
InvalidModelSBOTerm |
Invalid sboTerm value for model
|
InvalidModifiersList |
Invalid element in list of modifiers
|
InvalidNamespaceOnSBML |
Invalid XML namespace for SBML container
|
InvalidNoArgsPassedToFunctionDef |
Incorrect number of arguments to function
|
InvalidNotesContent |
Invalid notes content
|
InvalidParameterSBOTerm |
Invalid sboTerm value for parameter
|
InvalidParameterUnits |
Invalid value for units in parameter definition
|
InvalidRateRuleVariable |
Invalid variable reference in rate rule
|
InvalidReactantsProductsList |
Invalid element in list of reactants or products
|
InvalidReactionSBOTerm |
Invalid sboTerm value for reaction
|
InvalidRuleOrdering |
Invalid ordering of rules
|
InvalidRuleSBOTerm |
Invalid sboTerm value for rule
|
InvalidSBMLLevelVersion |
Invalid SBML Level and Version
|
InvalidSBOTermSyntax |
Invalid sboTerm value syntax
|
InvalidSpeciesCompartmentRef |
Invalid compartment reference
|
InvalidSpeciesReference |
Invalid species value in species reference
|
InvalidSpeciesReferenceSBOTerm |
Invalid sboTerm value for species reference
|
InvalidSpeciesSBOTerm |
Invalid sboTerm value for species
|
InvalidSpeciesSusbstanceUnits |
Invalid value of units
|
InvalidSpeciesTypeRef |
Invalid speciesType reference
|
InvalidSpeciesTypeSBOTerm |
Invalid sboTerm value for species type
|
InvalidSubstanceRedefinition |
Invalid redefinition of substance
|
InvalidTimeRedefinition |
Invalid redefinition of time
|
InvalidTriggerSBOTerm |
Invalid sboTerm value for event trigger
|
InvalidUnitDefId |
Invalid id value for unit definition
|
InvalidUnitIdSyntax |
Invalid unit identifier syntax
|
InvalidUnitKind |
Invalid value of kind in unit definition
|
InvalidVolumeRedefinition |
Invalid redefinition of volume
|
KineticLawNotSubstancePerTime |
Kinetic law units are not substance/time
|
KineticLawParametersAreLocalOnly |
Cannot use <kineticLaw> parameter outside local scope
|
L1V1CompartmentVolumeReqd |
Compartment volume must be specified
|
LambdaOnlyAllowedInFunctionDef |
Use of <lambda> not permitted outside of a <functionDefinition>
|
LocalParameterShadowsId |
Local parameters defined in a kinetic law shadow global parameters
|
MathResultMustBeNumeric |
Formula result is not a numerical value
|
MetaIdNotValidAttribute |
Attribute metaid not supported in SBML Level 1
|
MissingAnnotationNamespace |
Missing declaration of XML namespace for annotation
|
MissingEventAssignment |
Missing event assignment in event definition
|
MissingModel |
Missing model
|
MissingOrInconsistentLevel |
Missing or inconsistent value for level attribute
|
MissingOrInconsistentVersion |
Missing or inconsistent value for version attribute
|
MissingSpeciesCompartment |
Missing compartment value for species
|
MissingTriggerInEvent |
Missing trigger in event definition
|
ModelSBOBranchChangedBeyondL2v2 |
The allowable sboTerm values for model differ for this SBML
Level+Version
|
ModelSBOBranchChangedBeyondL2v3 |
The allowable sboTerm values for model differ for this SBML
Level+Version
|
ModelSBOBranchChangedInL2v4 |
The allowable sboTerm values for model differ for this SBML
Level+Version
|
MultipleAssignmentOrRateRules |
Multiple rules for the same variable
|
MultipleEventAssignmentsForId |
Multiple event assignments for the same variable
|
MultipleInitAssignments |
Multiple initial assignments for the same symbol value
|
MultiplierNotValidAttribute |
Attribute multiplier on units not supported in SBML Level 1
|
MultSpeciesSameTypeInCompartment |
Cannot have multiple species of the same type in the same compartment
|
NameNotValidAttribute |
Attribute name on species references not supported in SBML Level 1
|
NeedCompartmentIfHaveSpecies |
Missing compartment in species definition
|
NoCompartmentTypeInL1 |
SBML Level 1 does not support compartment types
|
NoCompartmentTypeInL2v1 |
SBML Level 2 Version 1 does not support compartment types
|
NoConcentrationInZeroD |
No initialConcentration permitted if compartment is zero-dimensional
|
NoConstraintsInL1 |
SBML Level 1 does not support constraints
|
NoConstraintsInL2v1 |
SBML Level 2 Version 1 does not support constraints
|
NoDelayedEventAssignmentInL2v1 |
Attribute useValuesFromTriggerTime not supported in this
Level+Version of SBML
|
NoDelayedEventAssignmentInL2v2 |
Attribute useValuesFromTriggerTime not supported in this
Level+Version of SBML
|
NoDelayedEventAssignmentInL2v3 |
Attribute useValuesFromTriggerTime not supported in this
Level+Version of SBML
|
NoEventsInL1 |
SBML Level 1 does not support events
|
NoEventTimeUnitsInL2v3 |
Attribute timeUnits not supported in this Level+Version of SBML
|
NoEventTimeUnitsInL2v4 |
The timeUnits attribute is invalid in this Level+Version of SBML
|
NoFancyStoichiometryMathInL1 |
SBML Level 1 does not support non-integer nor non-rational
stoichiometry formulas
|
NoFunctionDefinitionsInL1 |
SBML Level 1 does not support function definitions
|
NoIdOnSpeciesReferenceInL2v1 |
SBML Level 2 Version 1 does not support the id attribute on species
references
|
NoInitialAssignmentsInL1 |
SBML Level 1 does not support initial assignments
|
NoInitialAssignmentsInL2v1 |
SBML Level 2 Version 1 does not support initial assignments
|
NoKineticLawSubstanceUnitsInL2v2 |
The substanceUnits attribute is invalid in this Level+Version of SBML
|
NoKineticLawSubstanceUnitsInL2v3 |
Attribute substanceUnits not supported in this Level+Version of SBML
|
NoKineticLawSubstanceUnitsInL2v4 |
The substanceUnits attribute is invalid in this Level+Version of SBML
|
NoKineticLawTimeUnitsInL2v2 |
The timeUnits attribute is invalid in this Level+Version of SBML
|
NoKineticLawTimeUnitsInL2v3 |
Attribute timeUnits not supported in this Level+Version of SBML
|
NoKineticLawTimeUnitsInL2v4 |
The timeUnits attribute is invalid in this Level+Version of SBML
|
NonBoundarySpeciesAssignedAndUsed |
Cannot use non-boundary species in both reactions and rules
simultaneously
|
NonConstantLocalParameter |
Parameters local to a kinetic law must have constant=true
|
NonConstantSpeciesUsed |
Cannot use non-boundary, constant species as reactant or product
|
NoNon3DComparmentsInL1 |
SBML Level 1 only supports three-dimensional compartments
|
NoNonIntegerStoichiometryInL1 |
SBML Level 1 does not support non-integer stoichiometry attribute
values
|
NoReactantsOrProducts |
Cannot have a reaction with neither reactants nor products
|
NoSBOTermsInL1 |
SBML Level 1 does not support the sboTerm attribute
|
NoSBOTermsInL2v1 |
SBML Level 2 Version 1 does not support the sboTerm attribute
|
NoSpatialUnitsInZeroD |
No spatialSizeUnits permitted if compartment is zero-dimensional
|
NoSpeciesSpatialSizeUnitsInL1 |
SBML Level 1 does not support species spatialSizeUnits settings
|
NoSpeciesSpatialSizeUnitsInL2v3 |
Attribute spatialSizeUnits not supported in this Level+Version of
SBML
|
NoSpeciesSpatialSizeUnitsInL2v4 |
The spatialSizeUnits attribute is invalid in this Level+Version of
SBML
|
NoSpeciesTypeInL2v1 |
SBML Level 2 Version 1 does not support species types
|
NoSpeciesTypesInL1 |
SBML Level 1 does not support species types
|
NotesContainsDOCTYPE |
XML DOCTYPE not permitted in notes
|
NotesContainsXMLDecl |
XML declarations not permitted in notes
|
NotesNotInXHTMLNamespace |
Notes not placed in XHTML namespace
|
NoTimeSymbolInFunctionDef |
<csymbol> for time used within the <math> of a function definition
|
NotSchemaConformant |
Not conformant to SBML XML schema
|
NotUTF8 |
Not UTF8
|
NoUnitMultipliersOrOffsetsInL1 |
SBML Level 1 does not support multipliers or offsets in unit
definitions
|
NoUnitOffsetInL2v2 |
The unit offset attribute is invalid in this Level+Version of SBML
|
NoUnitOffsetInL2v3 |
Attribute offset not supported in this Level+Version of SBML
|
NoUnitOffsetInL2v4 |
The unit offset attribute is invalid in this Level+Version of SBML
|
NumericOpsNeedNumericArgs |
Non-numerical argument given to numerical operator
|
ObseleteSBOTerm |
Obsolete sboTerm value
|
OffsetNoLongerValid |
offset not supported in this Level+Version of SBML
|
OffsetNotValidAttribute |
Attribute offset on units only available in SBML Level 2 Version 1
|
OpsNeedCorrectNumberOfArgs |
Incorrect number of arguments to operator
|
OverdeterminedSystem |
Model is overdetermined
|
ParameterShouldHaveUnits |
It's best to declare units for every parameter in a model
|
PieceNeedsBoolean |
Second argument of <piece> must yield a boolean value
|
PiecewiseNeedsConsistentTypes |
<piecewise> terms have inconsistent data types
|
RateRuleCompartmentMismatch |
Mismatched units in rate rule for compartment
|
RateRuleForConstantEntity |
Cannot reassign a constant in a rate rule
|
RateRuleParameterMismatch |
Mismatched units in rate rule for parameter
|
RateRuleSpeciesMismatch |
Mismatched units in rate rule for species
|
RecursiveCompartmentContainment |
Recursive nesting of compartments via outside
|
RecursiveFunctionDefinition |
Recursive function definition
|
SBMLNamespaceInAnnotation |
Invalid use of SBML XML namespace in annotation
|
SBOTermNotUniversalInL2v2 |
The sboTerm attribute is invalid for this component in Level 2
Version 2
|
SBOTermNotValidAttributeBeforeL2V2 |
The sboTerm attribute is invalid for this component before Level 2
Version 2
|
SBOTermNotValidAttributeBeforeL2V3 |
sboTerm not available on this component before SBML Level 2 Version 3
|
SpatialSizeUnitsNotValidAttribute |
Attribute spatialSizeUnits on species not supported in SBML Level 1
|
SpatialSizeUnitsRemoved |
Attribute spatialSizeUnits not supported in this Level+Version of
SBML
|
SpatialUnitsInOneD |
Invalid value of spatialSizeUnits for a one-dimensional compartment
|
SpatialUnitsInThreeD |
Invalid value of spatialSizeUnits for a three-dimensional compartment
|
SpatialUnitsInTwoD |
Invalid value of spatialSizeUnits for a two-dimensional compartment
|
SpeciesCompartmentRequiredInL1 |
In SBML Level 1, a value for compartment is mandatory in species
definitions
|
SpeciesTypeNotValidAttribute |
Attribute speciesType on species not supported in SBML Level 1
|
SpeciesTypeNotValidComponent |
Species types not supported in SBML Level 1
|
StoichiometryMathNotValidComponent |
lt;stoichiometryMath> not supported in SBML Level 1
|
StrictSBORequiredInL2v2 |
SBML Level 2 Version 2 requires strict sbo consistency
|
StrictSBORequiredInL2v3 |
SBML Level 2 Version 3 requires strict sbo consistency
|
StrictUnitsRequiredInL1 |
SBML Level 1 requires strict unit consistency
|
StrictUnitsRequiredInL2v1 |
SBML Level 2 Version 1 requires strict unit consistency
|
StrictUnitsRequiredInL2v2 |
SBML Level 2 Version 2 requires strict unit consistency
|
StrictUnitsRequiredInL2v3 |
SBML Level 2 Version 3 requires strict unit consistency
|
SubsUnitsAllowedInKL |
Disallowed value for attribute substanceUnits
|
SubsUnitsNoLongerValid |
substanceUnits not supported in this Level+Version of SBML
|
TimeUnitsAllowedInKL |
Disallowed value for attribute timeUnits
|
TimeUnitsEvent |
Units of timeUnits are not time units
|
TimeUnitsNoLongerValid |
timeUnits not supported in this Level+Version of SBML
|
TimeUnitsRemoved |
The timeUnits attribute is invalid in this Level+Version of SBML
|
TriggerMathNotBoolean |
Non-boolean math expression in trigger definition
|
UndeclaredSpeciesInStoichMath |
Undeclared species referenced in <stoichiometryMath> formula
|
UndeclaredSpeciesRef |
Undeclared species referenced in kinetic law formula
|
UndeclaredUnits |
Undeclared units
|
UndefinedOutsideCompartment |
Undefined compartment used as outside value
|
UnitsNotValidAttribute |
Attribute units not valid
|
UnknownError |
Unknown internal libSBML error
|
UnrecognisedSBOTerm |
Unrecognized sboTerm value
|
UnrecognizedElement |
Unrecognized element
|
ValuesFromTriggerTimeNeedDelay |
useValuesFromTriggerTime=false, but no delay defined in event
|
VariableNotValidAttribute |
Attribute variable not valid
|
VolumeLitreDefExponentNotOne |
Must use exponent=1 when defining volume in terms of litres
|
VolumeMetreDefExponentNot3 |
Must use exponent=3 when defining volume in terms of metres
|
ZeroDCompartmentContainment |
Invalid nesting of zero-dimensional compartments
|
ZeroDimensionalCompartmentConst |
Zero-dimensional compartments cannot be non-constant
|
ZeroDimensionalCompartmentSize |
Use of size is invalid for a zero-dimensional compartment
|
ZeroDimensionalCompartmentUnits |
Use of units is invalid for a zero-dimensional compartment
|
Modifier and Type | Method | Description |
---|---|---|
static SBMLException.Code |
valueOf(java.lang.String name) |
Returns the enum constant of this type with the specified name.
|
static SBMLException.Code[] |
values() |
Returns an array containing the constants of this enum type, in
the order they are declared.
|
public static final SBMLException.Code AnnotationNotesNotAllowedLevel1
public static final SBMLException.Code ApplyCiMustBeModelComponent
public static final SBMLException.Code ApplyCiMustBeUserFunction
public static final SBMLException.Code ArgsToEqNeedSameType
public static final SBMLException.Code AssignmentToConstantEntity
public static final SBMLException.Code AssignRuleCompartmentMismatch
public static final SBMLException.Code AssignRuleParameterMismatch
public static final SBMLException.Code AssignRuleSpeciesMismatch
public static final SBMLException.Code BadCsymbolDefinitionURLValue
public static final SBMLException.Code BadMathML
public static final SBMLException.Code BadMathMLNodeType
public static final SBMLException.Code BooleanOpsNeedBooleanArgs
public static final SBMLException.Code BothAmountAndConcentrationSet
public static final SBMLException.Code BothStoichiometryAndMath
public static final SBMLException.Code CannotConvertToL1V1
public static final SBMLException.Code CelsiusNoLongerValid
public static final SBMLException.Code CircularRuleDependency
public static final SBMLException.Code CompartmentShouldHaveSize
public static final SBMLException.Code CompartmentTypeNotValidAttribute
public static final SBMLException.Code CompartmentTypeNotValidComponent
public static final SBMLException.Code ConstantNotValidAttribute
public static final SBMLException.Code ConstantSpeciesNotValidAttribute
public static final SBMLException.Code ConstraintContainsDOCTYPE
public static final SBMLException.Code ConstraintContainsXMLDecl
public static final SBMLException.Code ConstraintMathNotBoolean
public static final SBMLException.Code ConstraintNotInXHTMLNamespace
public static final SBMLException.Code ConstraintNotValidComponent
public static final SBMLException.Code DelayUnitsNotTime
public static final SBMLException.Code DisallowedDefinitionURLUse
public static final SBMLException.Code DisallowedMathMLEncodingUse
public static final SBMLException.Code DisallowedMathMLSymbol
public static final SBMLException.Code DisallowedMathTypeAttributeUse
public static final SBMLException.Code DisallowedMathTypeAttributeValue
public static final SBMLException.Code DuplicateAnnotationInvalidInL2v2
public static final SBMLException.Code DuplicateAnnotationInvalidInL2v3
public static final SBMLException.Code DuplicateAnnotationInvalidInL2v4
public static final SBMLException.Code DuplicateAnnotationNamespaces
public static final SBMLException.Code DuplicateComponentId
public static final SBMLException.Code DuplicateLocalParameterId
public static final SBMLException.Code DuplicateMetaId
public static final SBMLException.Code DuplicateUnitDefinitionId
public static final SBMLException.Code EmptyListElement
public static final SBMLException.Code EmptyListInKineticLaw
public static final SBMLException.Code EmptyListInReaction
public static final SBMLException.Code EmptyListOfUnits
public static final SBMLException.Code EventAndAssignmentRuleForId
public static final SBMLException.Code EventAssignCompartmentMismatch
public static final SBMLException.Code EventAssignmentForConstantEntity
public static final SBMLException.Code EventAssignParameterMismatch
public static final SBMLException.Code EventAssignSpeciesMismatch
public static final SBMLException.Code EventNotValidComponent
public static final SBMLException.Code FailedMathMLReadOfDouble
public static final SBMLException.Code FailedMathMLReadOfExponential
public static final SBMLException.Code FailedMathMLReadOfInteger
public static final SBMLException.Code FailedMathMLReadOfRational
public static final SBMLException.Code FormulaInLevel1KL
public static final SBMLException.Code FuncDefNotValidComponent
public static final SBMLException.Code FunctionDefMathNotLambda
public static final SBMLException.Code HasOnlySubsNoSpatialUnits
public static final SBMLException.Code HasOnlySubsUnitsNotValidAttribute
public static final SBMLException.Code IdNotValidAttribute
public static final SBMLException.Code InconsistentArgUnits
public static final SBMLException.Code IncorrectCompartmentSpatialDimensions
public static final SBMLException.Code IncorrectOrderInConstraint
public static final SBMLException.Code IncorrectOrderInEvent
public static final SBMLException.Code IncorrectOrderInKineticLaw
public static final SBMLException.Code IncorrectOrderInModel
public static final SBMLException.Code IncorrectOrderInReaction
public static final SBMLException.Code InitAssignCompartmenMismatch
public static final SBMLException.Code InitAssignmentAndRuleForSameId
public static final SBMLException.Code InitAssignParameterMismatch
public static final SBMLException.Code InitAssignSpeciesMismatch
public static final SBMLException.Code InitialAssignNotValidComponent
public static final SBMLException.Code Invalid1DCompartmentUnits
public static final SBMLException.Code Invalid2DCompartmentUnits
public static final SBMLException.Code Invalid3DCompartmentUnits
public static final SBMLException.Code InvalidApplyCiInLambda
public static final SBMLException.Code InvalidAreaRedefinition
public static final SBMLException.Code InvalidAssignRuleVariable
public static final SBMLException.Code InvalidCiInLambda
public static final SBMLException.Code InvalidCompartmentSBOTerm
public static final SBMLException.Code InvalidCompartmentTypeRef
public static final SBMLException.Code InvalidCompartmentTypeSBOTerm
public static final SBMLException.Code InvalidConstraintContent
public static final SBMLException.Code InvalidConstraintSBOTerm
public static final SBMLException.Code InvalidDelaySBOTerm
public static final SBMLException.Code InvalidEventAssignmentSBOTerm
public static final SBMLException.Code InvalidEventAssignmentVariable
public static final SBMLException.Code InvalidEventSBOTerm
public static final SBMLException.Code InvalidFunctionDefReturnType
public static final SBMLException.Code InvalidFunctionDefSBOTerm
public static final SBMLException.Code InvalidIdSyntax
public static final SBMLException.Code InvalidInitAssignSBOTerm
public static final SBMLException.Code InvalidInitAssignSymbol
public static final SBMLException.Code InvalidKineticLawSBOTerm
public static final SBMLException.Code InvalidL1CompartmentUnits
public static final SBMLException.Code InvalidLengthRedefinition
public static final SBMLException.Code InvalidMathElement
public static final SBMLException.Code InvalidMetaidSyntax
public static final SBMLException.Code InvalidModelSBOTerm
public static final SBMLException.Code InvalidModifiersList
public static final SBMLException.Code InvalidNamespaceOnSBML
public static final SBMLException.Code InvalidNoArgsPassedToFunctionDef
public static final SBMLException.Code InvalidNotesContent
public static final SBMLException.Code InvalidParameterSBOTerm
public static final SBMLException.Code InvalidParameterUnits
public static final SBMLException.Code InvalidRateRuleVariable
public static final SBMLException.Code InvalidReactantsProductsList
public static final SBMLException.Code InvalidReactionSBOTerm
public static final SBMLException.Code InvalidRuleOrdering
public static final SBMLException.Code InvalidRuleSBOTerm
public static final SBMLException.Code InvalidSBMLLevelVersion
public static final SBMLException.Code InvalidSBOTermSyntax
public static final SBMLException.Code InvalidSpeciesCompartmentRef
public static final SBMLException.Code InvalidSpeciesReference
public static final SBMLException.Code InvalidSpeciesReferenceSBOTerm
public static final SBMLException.Code InvalidSpeciesSBOTerm
public static final SBMLException.Code InvalidSpeciesSusbstanceUnits
public static final SBMLException.Code InvalidSpeciesTypeRef
public static final SBMLException.Code InvalidSpeciesTypeSBOTerm
public static final SBMLException.Code InvalidSubstanceRedefinition
public static final SBMLException.Code InvalidTimeRedefinition
public static final SBMLException.Code InvalidTriggerSBOTerm
public static final SBMLException.Code InvalidUnitDefId
public static final SBMLException.Code InvalidUnitIdSyntax
public static final SBMLException.Code InvalidUnitKind
public static final SBMLException.Code InvalidVolumeRedefinition
public static final SBMLException.Code KineticLawNotSubstancePerTime
public static final SBMLException.Code KineticLawParametersAreLocalOnly
public static final SBMLException.Code L1V1CompartmentVolumeReqd
public static final SBMLException.Code LambdaOnlyAllowedInFunctionDef
public static final SBMLException.Code LocalParameterShadowsId
public static final SBMLException.Code MathResultMustBeNumeric
public static final SBMLException.Code MetaIdNotValidAttribute
public static final SBMLException.Code MissingAnnotationNamespace
public static final SBMLException.Code MissingEventAssignment
public static final SBMLException.Code MissingModel
public static final SBMLException.Code MissingOrInconsistentLevel
public static final SBMLException.Code MissingOrInconsistentVersion
public static final SBMLException.Code MissingSpeciesCompartment
public static final SBMLException.Code MissingTriggerInEvent
public static final SBMLException.Code ModelSBOBranchChangedBeyondL2v2
public static final SBMLException.Code ModelSBOBranchChangedBeyondL2v3
public static final SBMLException.Code ModelSBOBranchChangedInL2v4
public static final SBMLException.Code MultipleAssignmentOrRateRules
public static final SBMLException.Code MultipleEventAssignmentsForId
public static final SBMLException.Code MultipleInitAssignments
public static final SBMLException.Code MultiplierNotValidAttribute
public static final SBMLException.Code MultSpeciesSameTypeInCompartment
public static final SBMLException.Code NameNotValidAttribute
public static final SBMLException.Code NeedCompartmentIfHaveSpecies
public static final SBMLException.Code NoCompartmentTypeInL1
public static final SBMLException.Code NoCompartmentTypeInL2v1
public static final SBMLException.Code NoConcentrationInZeroD
public static final SBMLException.Code NoConstraintsInL1
public static final SBMLException.Code NoConstraintsInL2v1
public static final SBMLException.Code NoDelayedEventAssignmentInL2v1
public static final SBMLException.Code NoDelayedEventAssignmentInL2v2
public static final SBMLException.Code NoDelayedEventAssignmentInL2v3
public static final SBMLException.Code NoEventsInL1
public static final SBMLException.Code NoEventTimeUnitsInL2v3
public static final SBMLException.Code NoEventTimeUnitsInL2v4
public static final SBMLException.Code NoFancyStoichiometryMathInL1
public static final SBMLException.Code NoFunctionDefinitionsInL1
public static final SBMLException.Code NoIdOnSpeciesReferenceInL2v1
public static final SBMLException.Code NoInitialAssignmentsInL1
public static final SBMLException.Code NoInitialAssignmentsInL2v1
public static final SBMLException.Code NoKineticLawSubstanceUnitsInL2v2
public static final SBMLException.Code NoKineticLawSubstanceUnitsInL2v3
public static final SBMLException.Code NoKineticLawSubstanceUnitsInL2v4
public static final SBMLException.Code NoKineticLawTimeUnitsInL2v2
public static final SBMLException.Code NoKineticLawTimeUnitsInL2v3
public static final SBMLException.Code NoKineticLawTimeUnitsInL2v4
public static final SBMLException.Code NonBoundarySpeciesAssignedAndUsed
public static final SBMLException.Code NonConstantLocalParameter
public static final SBMLException.Code NonConstantSpeciesUsed
public static final SBMLException.Code NoNon3DComparmentsInL1
public static final SBMLException.Code NoNonIntegerStoichiometryInL1
public static final SBMLException.Code NoReactantsOrProducts
public static final SBMLException.Code NoSBOTermsInL1
public static final SBMLException.Code NoSBOTermsInL2v1
public static final SBMLException.Code NoSpatialUnitsInZeroD
public static final SBMLException.Code NoSpeciesSpatialSizeUnitsInL1
public static final SBMLException.Code NoSpeciesSpatialSizeUnitsInL2v3
public static final SBMLException.Code NoSpeciesSpatialSizeUnitsInL2v4
public static final SBMLException.Code NoSpeciesTypeInL2v1
public static final SBMLException.Code NoSpeciesTypesInL1
public static final SBMLException.Code NotesContainsDOCTYPE
public static final SBMLException.Code NotesContainsXMLDecl
public static final SBMLException.Code NotesNotInXHTMLNamespace
public static final SBMLException.Code NoTimeSymbolInFunctionDef
public static final SBMLException.Code NotSchemaConformant
public static final SBMLException.Code NotUTF8
public static final SBMLException.Code NoUnitMultipliersOrOffsetsInL1
public static final SBMLException.Code NoUnitOffsetInL2v2
public static final SBMLException.Code NoUnitOffsetInL2v3
public static final SBMLException.Code NoUnitOffsetInL2v4
public static final SBMLException.Code NumericOpsNeedNumericArgs
public static final SBMLException.Code ObseleteSBOTerm
public static final SBMLException.Code OffsetNoLongerValid
public static final SBMLException.Code OffsetNotValidAttribute
public static final SBMLException.Code OpsNeedCorrectNumberOfArgs
public static final SBMLException.Code OverdeterminedSystem
public static final SBMLException.Code ParameterShouldHaveUnits
public static final SBMLException.Code PieceNeedsBoolean
public static final SBMLException.Code PiecewiseNeedsConsistentTypes
public static final SBMLException.Code RateRuleCompartmentMismatch
public static final SBMLException.Code RateRuleForConstantEntity
public static final SBMLException.Code RateRuleParameterMismatch
public static final SBMLException.Code RateRuleSpeciesMismatch
public static final SBMLException.Code RecursiveCompartmentContainment
public static final SBMLException.Code RecursiveFunctionDefinition
public static final SBMLException.Code SBMLNamespaceInAnnotation
public static final SBMLException.Code SBOTermNotUniversalInL2v2
public static final SBMLException.Code SBOTermNotValidAttributeBeforeL2V2
public static final SBMLException.Code SBOTermNotValidAttributeBeforeL2V3
public static final SBMLException.Code SpatialSizeUnitsNotValidAttribute
public static final SBMLException.Code SpatialSizeUnitsRemoved
public static final SBMLException.Code SpatialUnitsInOneD
public static final SBMLException.Code SpatialUnitsInThreeD
public static final SBMLException.Code SpatialUnitsInTwoD
public static final SBMLException.Code SpeciesCompartmentRequiredInL1
public static final SBMLException.Code SpeciesTypeNotValidAttribute
public static final SBMLException.Code SpeciesTypeNotValidComponent
public static final SBMLException.Code StoichiometryMathNotValidComponent
public static final SBMLException.Code StrictSBORequiredInL2v2
public static final SBMLException.Code StrictSBORequiredInL2v3
public static final SBMLException.Code StrictUnitsRequiredInL1
public static final SBMLException.Code StrictUnitsRequiredInL2v1
public static final SBMLException.Code StrictUnitsRequiredInL2v2
public static final SBMLException.Code StrictUnitsRequiredInL2v3
public static final SBMLException.Code SubsUnitsAllowedInKL
public static final SBMLException.Code SubsUnitsNoLongerValid
public static final SBMLException.Code TimeUnitsAllowedInKL
public static final SBMLException.Code TimeUnitsEvent
public static final SBMLException.Code TimeUnitsNoLongerValid
public static final SBMLException.Code TimeUnitsRemoved
public static final SBMLException.Code TriggerMathNotBoolean
public static final SBMLException.Code UndeclaredSpeciesInStoichMath
public static final SBMLException.Code UndeclaredSpeciesRef
public static final SBMLException.Code UndeclaredUnits
public static final SBMLException.Code UndefinedOutsideCompartment
public static final SBMLException.Code UnitsNotValidAttribute
public static final SBMLException.Code UnknownError
public static final SBMLException.Code UnrecognisedSBOTerm
public static final SBMLException.Code UnrecognizedElement
public static final SBMLException.Code ValuesFromTriggerTimeNeedDelay
public static final SBMLException.Code VariableNotValidAttribute
public static final SBMLException.Code VolumeLitreDefExponentNotOne
public static final SBMLException.Code VolumeMetreDefExponentNot3
public static final SBMLException.Code ZeroDCompartmentContainment
public static final SBMLException.Code ZeroDimensionalCompartmentConst
public static final SBMLException.Code ZeroDimensionalCompartmentSize
public static final SBMLException.Code ZeroDimensionalCompartmentUnits
public static SBMLException.Code[] values()
for (SBMLException.Code c : SBMLException.Code.values()) System.out.println(c);
public static SBMLException.Code valueOf(java.lang.String name)
name
- the name of the enum constant to be returned.java.lang.IllegalArgumentException
- if this enum type has no constant with the specified namejava.lang.NullPointerException
- if the argument is null